HonglanLi
HonglanLi
Dear all, I want to run percolator after MS Amanda (stand alone) search. I got *csv /mzid results file from MS Amanda. Is there a software that convert MS Amanda's...
I want to try tcrdock. conda env is installing well. But when I run examples, the errors are appeared. " No module ... tensorflow" when i fix the prob. then...
when i run this tool, i can only get the scores below: model_2_ptm_ft_plddt_0 model_2_ptm_ft_pae_0_0 ... model_2_ptm_ft_pae_1_1 So how i can get binding score using this tool?
Hi, I really want to know how to make mhc2 peptides' target_to_template_alignstring file when core peptide does not determined? Do I have to make all kinds of 11-residue subpeptides?
I ran the dian2.3.0 But it occurs the error as bellow: "installing library" ERROR: algothmic falure M...
Dear @vdemichev We are currently having difficulties identifying biotinylated peptides using DIA-NN. Even though we performed the search as described below, the number of identified biotin sites is extremely low—only...
Dear all, Please help me. I performed DIA measurements on cell samples to observe the effects of perturbations. I just want to remove the runs where the LC clearly failed....
I see the diann-manual. but i cannot find the difference between Total.Quantity and MS1 signal in reports.stats.tsv. Total.Quantity= total intensity sum of precursor MS1 signal: total intensity sum of precusor(MS1)...
Dear all, I'm currently looking at the pr_matrix file, but I noticed that the number of identified precursors per run is different from the counts in report.stats.tsv. Could it be...
I installed DIANN in window but it cannot work well. It gives the error just like this: ERROR: cannot read .raw files, please download and install .NET Runtime .NET SDK...