HansLambda
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HansLambda
Current workaround and observations: - The squidpy plotting functions are correctly calling the stored colors for each category in adata.uns when plotting the centroids stored in adata.obsm. - render_shapes() does...
Did you remove empty cells as suggested in the [vignette](https://satijalab.org/seurat/articles/seurat5_spatial_vignette_2.html#mouse-brain-10x-genomics-xenium-in-situ)? `xenium.obj 0)`