Hanjiangna

Hello Developer Sorry for the late response, as I was occupied with various exams. Below is a screenshot of the header section and a few lines of the record entries....

Hello Developer Thanks your reply.I will check the step of read mapping. Best wishes! Han jiangna

Thanks for your reply. nohup craq -g hap1.p4.fa -sms HifiClean.fastq -ngs 201_1_clean.fq,201_2_clean.fq -x map-hifi >craq.log& nohup craq -g hap2.p4.fa -sms HifiClean.fastq -ngs 201_1_clean.fq,201_2_clean.fq -x map-hifi >craq.log& cat hap1.p4.fa hap2.p4.fa >diploid.fa...

Thank you very much for your suggestions. My genome assembly is based on HiFi, ONT, and Hi-C data, assembled using Hifiasm. I'm wondering if some of the structural errors might...

Hello "How can I adjust the parameters to reduce the number of dumped_pairs?" Thanks

LIGATION_SITE = AGCT MIN_FRAG_SIZE = MAX_FRAG_SIZE = MIN_INSERT_SIZE = MAX_INSERT_SIZE = Without setting the above parameters, the result is as follows. Could you offer good suggestions regarding this ？ ...