Xiaohaohao

The VG call cannot complete the results

2

Hi, I am using the variation of the vg call sample, the task is done, but the vcf results only have partial results of only one chromosome and no results...

About panpop merge syri results

1

Hi zheng, I want to use panpop software to merge SV results of syri, and I want to know how to use --in_vcf to input the multiple vcf files in...

About guppy model

3

When I go through the first step (the command as guppy_basecaller -i fast5_pass/ -c ~/biosoft/ont-guppy-cpu/data/dna_r10.4.1_e8.2_400bps_sup.cfg --num_callers 10 --cpu_threads_per_caller 5 --save_path fastq --bam_out --moves_out basecall.bam) to get the basecaller.bam file, I...

About hicPCA error

1

Hi , I'm experiencing an issue with hicPCA, where it gives a ValueError. I'm using python version 3.8.19 and hicexplorer version 3.7.2. Here is the command I run: hicPCA --matrix...

Hi, I wonder if Megalodon software supports R10.4.1 chip to do methylation.