Lukas Weil

Results 16 comments of Lukas Weil

Hey, Regarding the align function: 1. The function is not only meant to join two frames in a 1to1 fashion (my fault to not provide a better example), but creates...

Actually there are multiple types that more or less look very similar: ```fsharp type TaggedSequence = { Tag: 'T; Sequence: seq = { Header : string; Sequence : 'a; }...

If I remember correctly, the `ClustalO` tool is executed and the output is directly read back into the F# runtime afterwards. It seems like the reader is not waiting until...

`I could reproduce the problem but:` The code you wrote above shouldn't even get that far because using the `ClustalOWrapper()` constructor with no parameters will be looking for a default...

The line `FastA.write id inPath (sequences |> Seq.map tsToFasta)` does write in `UTF8-BOM` encoding which does not seem to be supported by `ClustalO`. Copying the same fastA file into a...

_well yes, but actually no_ This is the path it tries for me: `C:\Users\schne\source\repos\CSBiology\BioFSharp\lib\clustal-omega\clustalo.exe` 💯 I think either we change it to look for a global clustal installation or we...

@Joott are you working on this? If not I'd look into it

File of interest: https://github.com/nfdi4plants/ARCtrl.NET/blob/main/tests/ARCtrl.NET.Tests/TestObjects/ARC_SimpleARC/isa.investigation.xlsx

And one additional advantage to the proposed solution: It places the `actual values` into the `predefined fields`, not the `comments`. Therefore a third party observer or tool with no `MIAPPE`...

What format was the input value in? (e.g. DD/MM/YY) What was the error with the output? Was it not a date anymore, just a different format or a wrong date?