HDictus

redo of #299 , Adresses #224 Allows convolution of an arbitrary number of arrays, also making seperable convolution possible in any configuration of any number of dimensions.

GPU acceleration

4

It seems it should be possible to gpu-accelerate the convolution in DSP.jl, as there are FFTs that are defined for versions of GPUArrays, and elementwise multiplication certainly is. I don't...

Assuming #269 or another fix for #202 gets merged in, a logical next step is to add a dims kwarg that allows, for example, convolution in 1st and 2nd dimension...

build_env_bionet fails when config_file is not explicitly provided

1

The default value of `None` for the kwarg `config_file` to `bmtk.utils.sim_setup.build_env_filternet` is an invalid one and causes an error, since a string or Path is expected. I suggest only passing...

**Describe the bug** A DriftingGratings object has a .cell_ids attribute and a get_response method. The documentation for get_response states that it returns an array of the form (num_orientations, num_temporal_frequencies, num_cells,...

Add include_empty keyword argument

8

When using get-like functions (edges.pathway_edges, nodes.get) it is common to concatenate the outputs of the functions to mimic the old bluepysnap interface. However, if no nodes/edges satisfy the query, instead...

Numpy operations on CircuitNodeIds

2

When CircuitNodeIds is converted to a numpy array it turns into a (N, 2) array rather than an array of N unique identifiers. This causes issues when using e.g. np.isin,...