GreyRockIQ

Hello I missing the some of the clusters that are in Seurat integrated data set when I do trajectory analysis through Seurat wrappers. Is that normal or have some reasons?...

Hello Is there a way to work with integrated data for identifying trajectories with monocle3? Thanks GreyRock

error in ordering cells step

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Hi @kpatel427 Thanks for the code. I am running into errors in 4. ordering cells below code as it is and any other change is not solving the issue.. cds

How to delete doublets from Seurat object

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Hello I have worked upto generating doublet score tsv files through scrublet. however I am having difficulty in adding these files to the metadata of Seurat object and further deletion...

Hello I am trying to get gseGO results with cluster profiler for 10X single cell data of Drosophila. my data are with "symbol" which is not working and so no...

Hello I am trying get heat map with Vsn-pyScenic pipeline generated output by Average regular activity by cluster code The complex heat map generated regulons are many per cell type....

Hello I am getting error with the code that you have given in 10k pbmc analysis in R for keeping scrublet calls in metadata code given: doublets