Question about repetitive peaks

[Drizzle-Zhang]

Hi,

In the .RDS file of scATAC-seq data, I found that there were repetitive peaks in the count matrix, but these peaks had different count values. Could you please tell me why it happens?

HC.ATAC@assays$ATAC@counts[c('chr1-229614091-229615272.1', 'chr1-229614091-229615272'),] 2 x 31304 sparse Matrix of class "dgCMatrix" [[ suppressing 48 column names ‘hft_w20_p3_r1_cell_0’, ‘hft_w20_p3_r1_cell_1’, ‘hft_w20_p3_r1_cell_2’ ... ]]

chr1-229614091-229615272.1 . . . . . 3 . . 2 . . . . . . . . . . . . . . . . . . . . 2 . . . . . . . . . . chr1-229614091-229615272 . . . . . . . . . . . 2 . . . . . . . . . . . 1 . . . . . . . . . . . . . . . .

chr1-229614091-229615272.1 . 3 . . . . . . ...... chr1-229614091-229615272 . . . . . . . . ......

.....suppressing 31256 columns in show(); maybe adjust 'options(max.print= *, width = *)' ..............................