GLking123

Hello, will you update the reference dataset? For example, the brain of fruit flies. Thank you for this useful tool, thank you.

Homotetraploid, super-large genome, with different parameters, the size of p_utg varies greatly？

2

Dear author, Thank you for developing such a milestone software, which greatly accelerates the efficiency of assembly. I am currently conducting assembly of a large genome of a plant species,...

Circular import and GPU version

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Hi, Thank you for developing such an interesting and practical tool. 1. I encountered a 'Circular import' error while running in the cluster, the details of the error are as...

PloidyPlot: Table part ./.finall.ktab.1 is missing ?

1

Hi, I attempted the new FastK. I ran multiple datasets separately and then used Fastmerge for the final combination. The commands are as follows: `FastK -v -t4 -k31 -T20 -P$outdir...

Hi: My genome size is approximately **50G**, and the database used is **embryophyta_odb10**. The evaluation results for Compleasm are as follows:  The evaluation results for BUSCO are as follows(--miniprot):...

OSError: [Errno 12] Cannot allocate memory

2

张老师 您好！ 判断超大基因组（50G）是否为异源或者同源染色体,集群内存5T, 最近运行总是报错，运行命令如下： `subphaser -i part1.fasta -c new_1.config -lower_count 3 -pre Al_out > Al.log` 报错信息如下： `24-08-06 23:49:35 [INFO] Filtering differential kmers Traceback (most recent call last): File "/public/home/zengpeng/environment/SubPhaser/bin/subphaser", line...

Hi, KatharinaHoff, I am trying to use reference genome + transcriptome data of the same species for braker annotation. When I passed the job, within 5 days, I get an...