Greg Hogue

icon indicating an email [email protected]

icon company Ontario Institute for Cancer Research icon location Burlington, ON icon location Bioinformatician🧬OICR BMath(CS,Stats,Bioinfo)🎓UWaterloo

Results 2 issues of Greg Hogue

Handle new splice effects in ensembl-vep version 105

Per https://github.com/Ensembl/ensembl-vep/releases/tag/release%2F105.0 there are 3 new effect terms in VEP that need handling. - splice_donor_5th_base_variant (SO:0001787) - splice_donor_region_variant (SO:0002170) - splice_polypyrimidine_tract_variant (SO:0002169) I set the priority to match splice_region_variant (see...

Update tests for move to ethers 4.0.x

task