Gordon Beattie
Gordon Beattie
Note: This is an enhancement suggestion, not a bug Unless I'm mistaken, there is no option in plot cells to adjust the layout of the plots when more than one...
Hey, I've recently run the standard pipeline and we were surprised to see an interaction missing (Fasl - Fas) that we expected to see in the results. I checked the...
Hey, trying to run gene.relative.velocity.estimates and getting the error below! Thanks in advance for any assistance! ``` > rvel.cd
Hey! This issue is linked with the scVelo tutorial which uses seurat-disk. I used the exact code form the tutorial and came across this error: ``` > SaveH5Seurat(bm, filename =...
Hey! Installing as recommended here (https://rdrr.io/github/mojaveazure/loomR/), however getting the error below. Thanks in advance for any help! ``` > remotes::install_github("mojaveazure/loomR") Downloading GitHub repo mojaveazure/loomR@master ✔ checking for file ‘/private/var/folders/ll/jmydhb6n7jqg5rv_c58jxkkh0000gn/T/RtmpV9Trlp/remotes581e717ca0/mojaveazure-loomR-df0144b/DESCRIPTION’ ......
Hey, great package! I am performing the differential analysis as described in your vignette on my own data. I'm presuming something is missing in my understanding of the outputs, but...
Hi, I was coming across a lot of missing FOVs and saw you recently updated proseg to 1.0.6 which has some more operability with CosMx data and may help with...
Hi, Just getting to grips with this pipeline and I'm having an issue with RunBLOBFISH, see below for what I've done and the error, please let me know if I...