Graeme Ford

icon indicating a website link https://www.thedesignhammock.co.za/ icon indicating an email [email protected]

icon company @Tuks-ICMM | @The-Design-Hammock-PTY-Ltd icon location Pretoria icon location I am a highly motivated Bioinformatics postgraduate student with a constant drive for lifelong learning. I have a passion for biology and computers.

Results 4 issues of Graeme Ford

Suggestion: Add access to work with intersection values

2 comment

I would like to be able to work with the actual data generated by the UpSetR package in terms of the number of possible intersections generated and their associated value....

Add GATK ValidateVariants

2 comment

### Description An implementation of the GATK ValidateVariants tool ### QC For all wrappers added by this PR, I made sure that * [x] there is a test case which...

stale: contribution welcome
Stale

Snakemake `--generate-unit-tests` system breaks relative paths

When using the unit tests generated by Snakemake, I am unable to actually RUN the tests as the testing system does not re-set the default working directory to the project...

`tribin` error with 'remove accumulation bins with no data'

1 comment

I am attempting to plot some data using matplotlib sub-figures (About 64 graphs total), and also plot a tri-bin shading using the log scaling and a gridsize of 4. All...