sei-framework icon indicating copy to clipboard operation
sei-framework copied to clipboard

code to run sei and obtain sei and sequence class predictions

Results 15 sei-framework issues
Sort by recently updated
recently updated
newest added

This is my config file ![1720457543497](https://github.com/FunctionLab/sei-framework/assets/85922017/dd308352-815e-46ac-8424-b2ed8903429e) I got the model to train with our data, but the result is a bit wired. The train loss is decreasing but the val...

Hi I am training the Sei model with pig data. However, during the training process, I noticed that all the loss values in the output file "selene_sdk.train_model.validation.txt" are consistently zero....

Hi I am training the Sei model and predicting variant effects in cattle, but I found the script contains "projvec_targets.npy" and histone_inds.npy. I am wondering how I can prepare these...

Hello, I want to apply your sei-model to my own data set. According to the help file you posted, I installed the corresponding version of the software. First, I conducted...

Hi Sei team, I am interested in 'Sequence class variant effect score', and wondering whether pre-computed files are uploaded somewhere. I know that you provide useful web server, but I...