fengzhang

My pipe file saves as hello.pipe in path of "~/test" and it looks : ` hello = { exec "echo a > a.txt; echo Hello | cat $input.txt - >...

How to control the position of multiple legends

1

``` library(ComplexHeatmap) library(circlize) expr = readRDS(system.file(package = "ComplexHeatmap", "extdata", "gene_expression.rds")) mat = as.matrix(expr[, grep("cell", colnames(expr))]) base_mean = rowMeans(mat) mat_scaled = t(apply(mat, 1, scale)) type = gsub("s\\d+_", "", colnames(mat)) ha =...

How can I perform a variance stabilizing transformation on the proportions estimated by [spacexr](https://github.com/dmcable/spacexr)? I have the weight matrix below, where row is spot id, column is cell type name,...

How to fit the cell type proportion of spots in visium spatial transcriptome data?

1

How can I perform a variance stabilizing transformation on the proportions estimated by [spacexr](https://github.com/dmcable/spacexr)? I have the weight matrix below, where row is spot id, column is cell type name,...