Felicia JIANG

> Enabling MPS helps. (nvidia-cuda-mps-control -d) https://docs.nvidia.com/deploy/mps/index.html This works!~

@fairliereese Hi, I have the same ERROR and ran with the latest commits. Here's the output: Traceback (most recent call last): File "xxx/miniconda3/envs/isoseq/lib/python3.7/multiprocessing/process.py", line 297, in _bootstrap self.run() File "xxx/miniconda3/envs/isoseq/lib/python3.7/multiprocessing/process.py",...

> Dear RiboCode developers, > > According to the documentation, it is recommended to include outFilterMultimapNmax 1 parameter in STAR alignment to exclude non-unique alignments and reduce noise for downstream...

Thanks for your answer. I updated the py3dmol and it happened to work this noon. However, I don't think that's the reason, because the script of visualization still fails on...

Dear Woody, Thanks for your reply. My groupa.txt is: sysu_158TR.transcript.sorted.bam sysu_200TR.transcript.sorted.bam sysu_207TR.transcript.sorted.bam sysu_218TR.transcript.sorted.bam sysu_261TR.transcript.sorted.bam sysu_267TR.transcript.sorted.bam sysu_266TR.transcript.sorted.bam sysu_282TR.transcript.sorted.bam sysu_319TR.transcript.sorted.bam sysu_332TR.transcript.sorted.bam sysu_359TR.transcript.sorted.bam sysu_418TR.transcript.sorted.bam sysu_392TR.transcript.sorted.bam sysu_398TR.transcript.sorted.bam sysu_407TR.transcript.sorted.bam sysu_437TR.transcript.sorted.bam sysu_610TR.transcript.sorted.bam sysu_655TR.transcript.sorted.bam sysu_922TR.transcript.sorted.bam sysu_1013TR.transcript.sorted.bam sysu_1232TR.transcript.sorted.bam...

Thank you for your prompt response! For TMscore, should I use the "evalue" or the "alntmscore" column? Additionally, how can I obtain the true E-values in the TM-align mode? Is...