ESDeutekom

Build fails, is there a singularity?

1

I cannot install the tool via bioconda, because the recipe is broken. I also cannot build from git, because there are several warning and then the install just fails. Can...

ROC and PR curve

2

Dear @pkrusche and team, I have done an analysis with Deepvariant variants called from a genome in a bottle sample. I did the analysis with hap.py with a singularity pulled...

Not an issue, but a question about uniqueByBestBitscore

3

Hi EnzoAndree, Thanks a lot for the parser. It is extremely useful. I am working on one myself, but it is not that easy unfortunately. Then I stumbled upon your...

[BUG] run time exceeds > 6 hours human exome

2

**Describe the bug** Dear bamtocov team, I have human WES data and am trying to run bamtocov. After 6 hours, not even half is done/calculated, even when using 24 threads....

Documentation Change: Add info on how to remove old data (like clean install)

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### Affected Page(s) https://jrnl.sh/en/stable/advanced/ ### What Could Be Better? I really love this tool! However, I would really like to know how to remove everything and start from scratch. I...

I have the same issue as [here](https://github.com/atks/vt/issues/10) (few years later). The command vt validate throws the name core dump error. I tried removing the .fai file, vt made a new...