Anik Dutta
Anik Dutta
Hello, Thank you for this super useful tool. I was able to run it successfully. However, I have a question regarding choosing the optimum `-t `value and `-p` model. I...
Hello, I have created a custom database with 20 fungal genomes of the same genus by assigning specific Taxonomic IDs to each of them. I did not download any library...
Hello, I have a custom database built in 2020. I have downloaded several indexes from this link https://benlangmead.github.io/aws-indexes/k2. I see a nice improvement while running a Kraken classification against one...
Hello, I am trying to install the galaxy-helm chart and then deploy it in Kubernetes cluster but facing some problems. I followed what is written on the repository to install....
Hi, Thanks for developing the tool. I was wondering whether it is possible to include GenomicsDBImport after running the GATK Haplotypecaller for SNP calling. Because for thousands of samples, I...
Hi, Thanks for developing the tools. It looks great. I was wondering if there is any way of visualizing the results using Pavian or Krona as it does for Kraken...
Hi, Do you plan to make a database for Eukaryotes e.g. Fungi? Because this is largely missing in many metagenomic tools. I thought having a RefSeq database for Eukaryotes would...
Hi, Thanks a lot for developing such a cool tool with a standalone app. I saw that after the classification, one can Extract species-specific fastq reads from the app. Would...