DriessenA

Slicing MuData across modalities

1

When slicing MuData, slicing only rows or wanting more columns than are present only in the first modality causes 'IndexError: positional indexers are out-of-bounds' **To Reproduce** IN `mdata` OUT `MuData...

Mismatch between provided configs and checkpoints

2

Hi, I'm trying to load a pretrained model for which the weights are provided in: [checkpoint weights](https://f003.backblazeb2.com/file/chemCPA-models/chemCPA_models.zip). For this I wanted to use the `load_model` function from `notebooks/utils.py`, which requires...

Adding conditional monge gap

4

For now we've only implemented `cmonge_gap_from_samples`, we will follow with a `ConditionalMongeGapEstimator`.

Adding conditional monge to ott-jax

3

Dear developers, **Problem statement** Current Monge Gap implementation doesn't extend to unseen/novel conditions **Solution** We've implemented a conditional monge gap as extension of the monge gap from ott-jax, see [paper](https://openreview.net/pdf/832bd10e4ed56ccc07f250f80cb1d5013fe04731.pdf)...