Tanguy Damart
Tanguy Damart
Hello @gincru, by "the code simplecell", are you referring to the notebook https://github.com/BlueBrain/BluePyOpt/blob/master/examples/simplecell/simplecell.ipynb ?
Did you also copy in your local working directory the morphology that is used by the notebook (simple.swc) ?
Indeed you do need to install BluePyOpt to execute this code. With BluePyOpt installed, I was not able to replicate the issue. With it installed, could you check that the...
You can get this last error if you execute the jupyter cell twice without restarting the jupyter kernel.
Does #350 answer entirely to what was requested here ?
> > The setup.py needs to be updated to include LFPy. Also we will need tests to maintain the test coverage above 90%. > > It was not added on...
@alejoe91 If you agree, I will rollback the changes to parameters,py and parameterscalers.py. We were using them for the Hallermann model but it is not use anymore. It will also...
@alejoe91 thinking about it more, it might be useful for someone else some day. I am not sure what should be done.
It doesn't look like it: https://github.com/alejoe91/multimodalfitting/blob/master/cell_models/hay_ais/parameters.json
> in the exp models: https://github.com/alejoe91/multimodalfitting/blob/master/cell_models/cell1_211011_3436/parameters.json#L656-L670 Maybe I misunderstood, but that still works with vanilla BPO as it does not use a parameter dependency.