DerKevinRiehl
DerKevinRiehl
https://github.com/DerKevinRiehl/seqkit-conda-windows/ Here you go. Please tell me if I need to do anything else or I did not clearly enough state out that the software is written by you :)....
Dear Li Yongbin, thanks for your message and support! @Manaswil Maybe this was a temporary server issue of conda. Could the guidance already help solving your issue? Thanks, Best, Kevin
Dear Ylia Solomennikowa, to help you better, I need to know at which of the steps you are using reasonaTE. Are you still at **Step 2) Annotate genome with annotation...
Dear KangHu, thanks for your interest in our work. Unfortunately, there is no offering except TransposonDB, which is organized according to our and not Wickers scheme. When designing our scheme...
Dear [xiekunwhy](https://github.com/xiekunwhy), please read our paper if you have questions about the TransposonDB. https://academic.oup.com/nar/article/50/11/e64/6541023?login=false TransposonDB is a collection of known transposon sequences from many different databases. Currently there are more...
Hello Janna Fierst, thanks for your interest in our work. TransposonUltimate can only annotate Transposons in general, and also classify them according to the taxonomy we propose. You might then,...
Hello Egor-Lebedev, thank you very much for your interest in TransposonUltimate! In your question you are referring to mode 2 "prediction evaluation" of the tool transposon classifier RFSB, which is...
Dear Egor, that is exactly the point in evaluation. You need labels that you consider as ground truth. You could for example let our tool classify your transposons and than...
Dear Kenji, thank you for your interest and question. Please note, I am not the official author of SINEFinder, rather I "saved" all these established, frequently used tools, and made...
Dear Bob, thank you very much for your interest in our software. To your question: - RFSB is a transposon classification software, it uses TransposonDB. - reasonaTE is a transposon...