Dennis

Hey Guillawme, thank you for your quick response. This is what I thought. This is principally not really possible. I have tried with all available pre-trained models. Unfortunately, all pre-trained...

Hey Guillawme, thank you for your quick reply and sorry for my late response. Indeed, I have already tested JANNI, while it works quite good on conventional micrographs, it performs...

Did anything came up since then. I am also looking for 2D coloured noise generator. I believe there is an implementation in matlab, but I would of course prefer an...

Okay, I will have a look. But still, could you provide a rough instruction/doc/readme on how to actually use noise2atom. I mean it appears to perform quite well, so I...

> 1.) I will prepare a quick readme file for noise2atom. That would be great! > 2.) Please find a reference implementation from this file: https://github.com/fengwang/Noisy_Predestination/blob/main/train_7.py Let me know if...

I experience the exact same issue. I also thought this should be an easy fix, but apparently there is more to it. Training works well, but somehow the path variable...

I have just checked back on it. Turns out the models (.sav files) are still written despite the error thrown after the last epoch as been run through. The error...

Here is the command that I run that produces the error: !topaz denoise -a /Data/erc-3/ddannecker/noise_analysis/output/idpc/denoised_movies/topaz/even_set/ \ -b /Data/erc-3/ddannecker/noise_analysis/output/idpc/denoised_movies/topaz/odd_set/ \ -d 1 --save-prefix /Data/erc-3/ddannecker/noise_analysis/output/idpc/denoised_movies/topaz/trained_models/ \ --preload The command is run inside...

Ah, okay. No I haven't but I can certainly try this. However, since it still works and I by now I have my denoised micrographs I am good in that...