Daniel Suveges
Daniel Suveges
Hi Guys, I'm form OpenTargets. One of our users reported that OT data fetched from S3 has some problem: the data seems to have unexplainable duplication. We believe the problem...
I'm generating svg images in a python code that I want to convert into png, but it fails. I could pinpoint that the problem is because of the use of...
I'm wondering if there's an effort to make the possessive form consistent across all disease labels eg. `Alzheimer disease` vs `Alzheimer's disease`? Currently it's used mixed: [ Early-onset autosomal dominant...
There has been a need create of a list of structs in multiple points of the codebase. This process is complicated as requires that the structs have consisted schema, which...
## Included: - [x] Study validation step + config - [x] StudyLocus validation step + config - [x] Airflow DAG to run validation steps ## Not included: These steps for...
## ✨ Context Upon iterating on the variant page a number of points have been identified that can be improved. For more details see [this comment](https://github.com/opentargets/issues/issues/3350#issuecomment-2241767928) ## 🛠 What does...
## ✨ Context There was a recent change that `studyType` in identifying study locus overlaps no longer comes from study index, instead of studyLocus. It came with a side effect...
A simple update on how Ontoma uses pronto to interact with ontologies. So far upon initialising the ontologies, a bunch of warnings are thrown at users, but this PR removes...
## ✨ Context Column level metadata can be defined/added based on the dataset schema JSON files. This information then can be baked into the exported data, so any time the...
Hi Guys, Besides making the datasets released by our pipelines more ML friendly, we also use croissant JSON output to provide description of the datasets on the UI. I noticed...