Christopher Andrew Mancuso

icon indicating a website link https://www.linkedin.com/in/christopher-mancuso-97b638133/ icon indicating an email [email protected]

icon company University of Colorado Anschutz icon location Department of Biostatistics and Informatics icon location Providing bioinformatics support to researchers and clinicians through the Center for Innovative Design and Analysis at the CU Anschutz Medical Campus

Results 20 comments of Christopher Andrew Mancuso

OWL files seem empty so can't convert to OBO

Thanks @balhoff and @matentzn! This has definitely got me headed in the right direction. I was able to generate the files using robot and I will look at those and...

OWL files seem empty so can't convert to OBO

Thanks for all the information, it has all been super helpful! I will be on the look out for upheno2 as well!

change example and defaults

I think the example could be for a BioGRID Embedding example as the user would have to download the data, so will no longer match the web server example. A...

change example and defaults

@RemyLau Two questions on this 1. I think it might be good to have a separate page on Read the Docs that walks through an example and displays some of...

change example and defaults

close and will open with a new issue for version 2

Reproducibility and Documentation

mention now that this repo is now to run like the web server and for custom data/models see OBNB

Reproducibility and Documentation

NAR submission guidelines https://academic.oup.com/nar/pages/submission_webserver @vincerubinetti

Reproducibility and Documentation

this was pretty general, so now all checkboxes have been completed or turned into more specific issues

Trimming R1 fast files in all aligners

@grst Thanks for taking the time to comment! I'm a nextflow novice but I tried to follow how adding `--protocol 10XV3` to the main run command changed the aligner options...

Trimming R1 fast files in all aligners

I will try to look into this and post what I find out here.