Ch. Julian Villabona Arenas

icon indicating a website link https://www.lshtm.ac.uk/aboutus/people/villabona-arenas.julian icon indicating an email [email protected]

icon company London School of Hygiene and Tropical Medicine icon location UK icon location Assistant Prof. at CMMID/LSHTM. Viruses and Phylogenies

Results 3 comments of Ch. Julian Villabona Arenas

ERROR: Tree taxa and alignment sequence do not match

Any solution to this? Im using version 2.1.3 and -keep-ident but the error keeps happening (with different datasets). `iqtree2 -s sim.fasta -m GTR+I+G -B 1000 -T AUTO -keep-ident -quiet` ERROR:...

KeyError in yield_plot and occupancy

Im using poretools 0.6.0 in a MacOs sierra 10.12.1 and having the same issue when files do not have template data.

[BUG] Latest release (3.0.10) includes NumPy code that won't build with NumPy 2.0

> Just in case it's useful to anyone, I had the same error, but it was fixed by by making sure to do, e.g., > > ``` > cimport numpy...