AMBER

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Bumps [numpy](https://github.com/numpy/numpy) from 1.18.3 to 1.22.0. Release notes Sourced from numpy's releases. v1.22.0 NumPy 1.22.0 Release Notes NumPy 1.22.0 is a big release featuring the work of 153 contributors spread...

dependabot[bot]

convert docs to reStructuredText because pypi only supports reStructuredText

graingert

We should maintain a CHANGELOG.md that always shows the changes made on the code. A user can by reading this file always understand which bugs are solved and which features...

pbelmann

Bumps [jinja2](https://github.com/pallets/jinja) from 3.1.2 to 3.1.3. Release notes Sourced from jinja2's releases. 3.1.3 This is a fix release for the 3.1.x feature branch. Fix for GHSA-h5c8-rqwp-cp95. You are affected if...

dependabot[bot]

mixed dtype for BINID can cause bins with same IDs to be split into separate bins

1

if BINID is a mixture of strings/ints I've noticed that individual int values can be imported as both strings and ints essentially splitting a single bin into two. I believe...

mattheatley

Bumps [pyarrow](https://github.com/apache/arrow) from 11.0.0 to 14.0.1. Commits ba53748 MINOR: [Release] Update versions for 14.0.1 529f376 MINOR: [Release] Update .deb/.rpm changelogs for 14.0.1 b84bbca MINOR: [Release] Update CHANGELOG.md for 14.0.1 f141709...

dependabot[bot]

Old files archive are not correct

2

Hello, sorry for writing the issue here, since I didn't find an email to contact any of the CAMI staff. I'm currently working on my bachelor thesis which including building...

SantaMcCloud

We used the following code to download anonymous_reads.fq.gz: ```shell /home1/jialh/tools/anaconda3/envs/mamba/bin/java -jar \ /public/home/jialh/metaHiC/workdir/CAMI2/camiClient.jar \ -d https://openstack.cebitec.uni-bielefeld.de:8080/swift/v1/CAMI_Gastrointestinal_tract CAMI_Gastrointestinal_tract -p fq.gz ``` Then we got the following error: ```shell (base) [jialh@head03 CAMI2]$...

JiaLonghao1997