Bilvikakasturi

Hi, I am facing the following issue when trying with the bcftools. (base) bilvikakasturi@Bilvikas-MacBook-Air pythonProject1 % bcftools view -G -H -R CUD_ldreg_chr3.txt ftp://ftp.1000genomes.ebi.ac.uk/vol1/ftp/data_collections/1000G_2504_high_coverage/working/20201028_3202_raw_GT_with_annot/20201028_CCDG_14151_B01_GRM_WGS_2020-08-05_chr3.recalibrated_variants.annotated.vcf.gz > CUD_1000g_chr3.vcf & [1] 82165 (base) bilvikakasturi@Bilvikas-MacBook-Air...

@pd3 It works in terminal thank you so much. But when I am trying to execute in the python script using os.system(path) it is still trying to access 1.8 and...

Hi @pd3 You can close this issue as I tried to replace 1.8 version in my system with 1.15 and it works fine. Thank you for the suggestions.