arthur issues

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                                            arthur

Aligned regions cover less than 1% of reference genome, something is not right

13:17:08 - [1;37mINFO[0m - |--Parsnp 2.0.5--| 13:17:08 - [1;37mINFO[0m - *********************************************************************** SETTINGS: |-refgenome: /share/home/wanglamei/Data/t10sal/fasta10/GCA_000003645.1_ASM364v1_genomic.fasta |-genomes: /share/home/wanglamei/Data/t10sal/fasta10/GCA_000008165.1_ASM816v1_genomic.fasta /share/home/wanglamei/Data/t10sal/fasta10/GCA_000008005.1_ASM800v1_genomic.fasta ...6 more file(s)... /share/home/wanglamei/Data/t10sal/fasta10/GCA_000003955.1_ASM395v1_genomic.fasta /share/home/wanglamei/Data/t10sal/fasta10/GCA_000008445.1_ASM844v1_genomic.fasta |-aligner: muscle |-outdir: /share/home/wanglamei/ParSNP/P_2024_09_25_131708925604 |-OS: Linux |-threads: 10...