Amanda Kedaigle
Amanda Kedaigle
I'm trying to use ChromVAR to read in output from the 10X cellranger-atac pipeline. I believe I have it working when reading in the peak_bc_matrix as my own count table,...
The web tool has support for new kinds of interactions we'd like to include eventually: The output of Garnet should be changed to indicate what genes were used to predict...
Hi! I was running into an issue when selecting TFs in my mouse data, because the motif names did not match many genes in the gene exp data. I ended...