AlexFryd

Hello Zhang, Ok I will give that a try! Thanks a lot! Kind Regards, Alex

Hello Zhang, I am running the following command: (regular Ribo-seq data) `ribotish predict -b path/to/bam/.bam -g path/to/gtf/.gtf -f path/to/fasta/genome.fa --transprofile PSITE_TRANSCRIPTS -o ribo_ORFs.txt ` as a really basic version of...

Hello! I had a look on the .bam files on the ENSG00000130477 locus to see the mapped reads, and it appears that there are no reads spanning the entire major...

Hello Andrey, I am attaching the assigned reads for my gene of interest. It seems that all of them classify as ambiguous, inconsistent and in general, unreliable? Best, Alex [UNC13A.assignments.txt](https://github.com/user-attachments/files/20821869/UNC13A.assignments.txt)