06Liz

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WARNING:root:nitorch uses its non-compiled backend (TS). Some algorithms may be slow. _ _ _ ____ | | | |_ __ (_) _ \ ___ ___ | | | | '_...

from pathlib import Path # Use environment variables to auto-detect whether we are running an a Compute Canada cluster: # Thanks to https://github.com/DM-Berger/unet-learn/blob/master/src/train/load.py for this trick. COMPUTECANADA = False TMP...

Where the decoder is downloaded from

而且那个链接也打不开

Thanks for your answer and your contribution.

with open( "/scratch/j/jlevman/jueqi/thesis_experiments/decoder/result_decoder_downsample_2.csv", "a", ) as file: writer = csv.writer(file) writer.writerow(row) return latent_vector_out @wendy-xiaozong Where is the /scratch/j/jlevman/jueqi/thesis_experiments/decoder/result_decoder_downsample_2.csv?

Hello, may I ask why the reconstructed syns images is incomplete and half missing when I test T1 images in IXI dataset?

The dataset dataset T1 022:http://brain-development.org/ixi-dataset/ ![图片1](https://github.com/BioMedAI-UCSC/InverseSR/assets/130451549/0d73ae08-a437-43bf-a144-0171a1cc02ca) ![图片2](https://github.com/BioMedAI-UCSC/InverseSR/assets/130451549/3e533a43-5b8b-4df7-935e-660a5b52f8b0) one is syns,the others is target. The code I'm running is /job_script/InverseSR(ddim).sh

> Hi, the image put into the model should be registered into a MNI space (the brain needs to be roughly in the center of the image), following what [the...

Hello,cloud you help me slove the problem? > 数据集 T1 022:http://brain-development.org/ixi-dataset/ ![图片1](https://private-user-images.githubusercontent.com/130451549/344399715-0d73ae08-a437-43bf-a144-0171a1cc02ca.png?jwt=eyJhbGciOiJIUzI1NiIsInR5cCI6IkpXVCJ9.eyJpc3MiOiJnaXRodWIuY29tIiwiYXVkIjoicmF3LmdpdGh1YnVzZXJjb250ZW50LmNvbSIsImtleSI6ImtleTUiLCJleHAiOjE3MTk5OTI5NTUsIm5iZiI6MTcxOTk5MjY1NSwicGF0aCI6Ii8xMzA0NTE1NDkvMzQ0Mzk5NzE1LTBkNzNhZTA4LWE0MzctNDNiZi1hMTQ0LTAxNzFhMWNjMDJjYS5wbmc_WC1BbXotQWxnb3JpdGhtPUFXUzQtSE1BQy1TSEEyNTYmWC1BbXotQ3JlZGVudGlhbD1BS0lBVkNPRFlMU0E1M1BRSzRaQSUyRjIwMjQwNzAzJTJGdXMtZWFzdC0xJTJGczMlMkZhd3M0X3JlcXVlc3QmWC1BbXotRGF0ZT0yMDI0MDcwM1QwNzQ0MTVaJlgtQW16LUV4cGlyZXM9MzAwJlgtQW16LVNpZ25hdHVyZT1hZTU0ZmI2OTI2YWRlNzQ5NGZlODNhMjAxYWE4YWU4ZTFlNTZiODNlYzdjNjFjNDVlOGZkN2ZhZTIwOWZlZGYwJlgtQW16LVNpZ25lZEhlYWRlcnM9aG9zdCZhY3Rvcl9pZD0wJmtleV9pZD0wJnJlcG9faWQ9MCJ9.BWcjkLQxjRiNCY1Sc_4a-s50MRjTd2ckEK3cGytvHtk) ![图片2](https://private-user-images.githubusercontent.com/130451549/344399733-3e533a43-5b8b-4df7-935e-660a5b52f8b0.png?jwt=eyJhbGciOiJIUzI1NiIsInR5cCI6IkpXVCJ9.eyJpc3MiOiJnaXRodWIuY29tIiwiYXVkIjoicmF3LmdpdGh1YnVzZXJjb250ZW50LmNvbSIsImtleSI6ImtleTUiLCJleHAiOjE3MTk5OTI5NTUsIm5iZiI6MTcxOTk5MjY1NSwicGF0aCI6Ii8xMzA0NTE1NDkvMzQ0Mzk5NzMzLTNlNTMzYTQzLTViOGItNGRmNy05MzVlLTY2MGE1YjUyZjhiMC5wbmc_WC1BbXotQWxnb3JpdGhtPUFXUzQtSE1BQy1TSEEyNTYmWC1BbXotQ3JlZGVudGlhbD1BS0lBVkNPRFlMU0E1M1BRSzRaQSUyRjIwMjQwNzAzJTJGdXMtZWFzdC0xJTJGczMlMkZhd3M0X3JlcXVlc3QmWC1BbXotRGF0ZT0yMDI0MDcwM1QwNzQ0MTVaJlgtQW16LUV4cGlyZXM9MzAwJlgtQW16LVNpZ25hdHVyZT05YzY3MDFkODk5ZmQyYzA5M2I1NWJmM2Q2ODIxMjA2MTg2MTY3N2I5MzFhNzZlY2U2Yjg4NTI3MTRlNDIzMDM2JlgtQW16LVNpZ25lZEhlYWRlcnM9aG9zdCZhY3Rvcl9pZD0wJmtleV9pZD0wJnJlcG9faWQ9MCJ9.ql0eINW4rH8kQTlfFBi7qynCQOxD61F_wz3m3BryzkY) 一个是 syns,另一个是 target。我正在运行的代码是 /job_script/InverseSR(ddim).sh @wendy-xiaozong @06Liz