Quanyu Chen

icon indicating a website link https://scholar.google.com/citations?user=IiiuVgIAAAAJ&hl=en icon indicating an email [email protected]

icon company Zhejiang University icon location Hangzhou, China icon location Senior undergraduate at College of Life Science, Zhejiang University.

Results 36 comments of Quanyu Chen

Application to primary assembly

Close due to long time inactivity.

Inquiry on interpretation

You can use the output `${prefix}.${threshold}.depth.bed` to identify potential assembly issues, while you could povide option `-p` to get plots for each chromosome/contig. As for 'circular or not', I don't...

Inquiry on interpretation

Close due to long time inactivity.

[M::main] ERROR during mapping (check files exists and are amino acid fastas)

I also got this error. Did you resolve this?

[M::main] ERROR during mapping (check files exists and are amino acid fastas)

hhhhh, I think so. It took me at least two hours to debug, an in the last I gave up and used liftoff..

Aborted (core dumped)

I stopped before `Fragment length distribution parameters re-estimated from alignment paths`, so I don't know the solution for your (and also my) problem.