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The TCGA svs filename used in this project
We attempted to summarize the patients in the TCGA with HER2 status and svs using the clinical data. We identified 172 patients with HER2 positive and 700 patients with HER2 negative. We further filtered out patients without IHC scores and got 131 patients with HER2 positive and 451 patients with HER2 negative. The findings differ from this work in patients with 101 HER2 positive and 608 HER2 negative. Could the author provide a detailed list of svs filenames so that we can better follow this work?