uabrc.github.io

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# Pull Request ## Overview - Adding resources that aid learning shell commands and scripts ## Proposed Changes -adding [Explain Shell](https://explainshell.com/) and [ShellCheck](https://www.shellcheck.net/) tools to the shell page ## Related...

bdu-birhanu

Adding users' responsibilities on Cheaha

1

# Pull Request ## Overview Adding a "users' responsibility section" to the index page of UAB cloud. ## Proposed Changes - Added section on possible responsibilities for users of Cheaha....

bdu-birhanu

# Pull Request ## Overview This pull request addresses the arrangement of content of Anaconda content on the docs, across multiple platforms (Cheaha, rc cloud). ## Proposed Changes 1. Moved...

iam4tune

Rearrange Anaconda content on docs

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Most information is here: https://docs.rc.uab.edu/workflow_solutions/using_anaconda Some information is here: https://docs.rc.uab.edu/cheaha/software/software/#anaconda-on-cheaha ## Collecting Cloud.rc specific information - [x] Move this: https://docs.rc.uab.edu/workflow_solutions/using_anaconda/#what-is-my-best-solution-for-installing-anaconda - [x] To here: https://docs.rc.uab.edu/uab_cloud/installing_software/#installing-software - [x] Note we have...

wwarriner

Adding notes on the practice of using `module reset`

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## Overview Notes on the practice of using `module reset` command at the start of sbatch scripts. ## Proposed Changes - Adding notes on the practice of `module reset' in...

bdu-birhanu

Documenting more S3 transfer utilities

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## What would you like to see added? ### Caveat! Our understanding is that `s5cmd` uses `md5` hashes to verify binary content integrity during uploads only, not downloads. For more...

wwarriner

Continuous integration

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Needs for CI: - [X] Checking validity of internal links without anchors (#240) - [ ] Checking validity of internal links with anchors - [ ] Checking validity of external...

wwarriner

Anaconda best practices for environment reproducibility

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### What would you like to see added? Blog post describing good practice for mixing conda and pip: https://www.anaconda.com/blog/using-pip-in-a-conda-environment Also relevant: https://pythonspeed.com/articles/conda-dependency-management/

wwarriner

feat: docs for creating a jupyter kernel running in singularity container

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We should add some docs to help folks create jupyter kernels that run inside singularity containers. I ran into this need recently when trying to use pytorch geometric installed in...

jprorama

- [x] Account Management - [ ] Data Management - [x] .../Long Term Storage - [ ] .../Transfer - [x] Workflow Solutions - [x] Cheaha Guide - [x] .../Open OnDemand...

wwarriner