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FileNotFoundError: [Errno 2] No such file or directory: 'bedtools'

Open sitems opened this issue 10 months ago • 0 comments

Within the conda environment, the command

parascopy pretable --force --fasta-ref ref.fa --output pretable.bed.gz

is not able to find bedtools. Probably it is not installed in the environment.

sitems avatar Jun 25 '25 17:06 sitems