Timofey Prodanov

Please do not merge, I am trying to update the build script.

I did not try to change mappy code, but an external function ``` def cigar_str(hit): return "".join(map(lambda x: str(x[0]) + 'MIDNSHP=X'[x[1]], hit.cigar)) ``` works fine

Just noticed, that I cannot set `Alt+Delete` as well, but can set `Ctrl+Delete`. Probably, here the reason is different.

Running ``` for key [Ctrl Alt Meta Shift] { var k = $key; set edit:insert:binding[$k+Backspace] = { echo $k } } ``` allows to run `Ctrl+Backspace`, but print `Meta`. All...

Thank you! I looked a bit into this part of the code, and I think the problem is in the number of generated hits, but I did not go there...

Thank you for looking into that! I will use the `-R 3` fix for now then!

In respect to my own script, I get even stranger error `invalid runtime keyword docker`, ```wdl version 2.0 struct Reference { File fasta File fai File kmer_counts } struct Cram...

Hi @wolfgang-braun , Thank you for using our tool! Theoretically, it should not be a problem, but you should try and check what happens. If there are any problems, please...

Hi! Thank you for using our tool! Regarding non-human genome, you can check out [this comment](https://github.com/tprodanov/parascopy/issues/1#issuecomment-1206283033), also maybe something from [this thread](https://github.com/tprodanov/parascopy/issues/4) will help you as well. Please write if...

Hi Mir, I did not quite get the restrictions about no indels, etc. Read recruitment was already available as a separate module https://locityper.vercel.app/commands#recruiting-reads For recruitment and mapping I now updated...