FES
FES copied to clipboard
02_Predicting_Risk_of_Ischemic_Stroke- Coefficients for RFE model
Trying to run the recursive feature elimination code I'm not able to see the log regression coefficients for all the RFE models created. The code is the following: https://github.com/topepo/FES/blob/master/02_Predicting_Risk_of_Ischemic_Stroke/02_04_Predictive_Modeling_Across_Sets.R
For example, when I run this code:
set.seed(63331)
img_int_filtered_rfe <- rfe(
img_int_filtered_recipe,
data = numericas_train,
sizes = 1:nrow(img_int_filtered_recipe$var_info)-1,
rfeControl = rfeCtrl,
metric = "ROC",
## train options
method = "glm",
trControl = internal_ctrl
)
And type:
>img_int_filtered_rfe$fit
Thats what I get:
Generalized Linear Model
30 samples
1 predictor
2 classes: 'N', 'Y'
No pre-processing
Resampling: None
Why I can't see the coefficients?
I modified the 'functions' parameter from 'caretFuncs' to 'lrFuncs' and now I get the coefficients.
If you look at the class of that object, it is train. If you use img_int_filtered_rfe$fit$finalModel, you should get the glm model