RetroSeq icon indicating copy to clipboard operation
RetroSeq copied to clipboard

$cfh or $currentTypeAnchorsFile?

Open kbrevs opened this issue 9 years ago • 0 comments

Hello! I am working on running through RetroSeq, and it seem that the discover stage is working - but the call stage give me this error, which I haven't been able to figure out which file it is missing?

Found sample: CPBWGS_11 Calling sample CPBWGS_11 Beginning paired-end calling... PE Call: >rnd-2_family-5LINE/CR1-Zenon(ReconFamilySize=93,FinalMultipleAlignmentSize=88) No such file or directory at retroseq.pl line 660, <$tfh> line 1.

Thanks! Kristian

kbrevs avatar Sep 05 '16 14:09 kbrevs