Michal Stolarczyk

and maybe paste the debug logs as well, run: ``` refgenie --verbosity 5 pull rCRSd/fasta ```

That's interesting, the logs don't show any issues. Can you try to download the archive with `wget` and the following Python code: ```python from urllib.request import urlretrieve urlretrieve("http://refgenomes.databio.org/v3/assets/archive/94e0d21feb576e6af61cd2a798ad30682ef2428bb7eabbb4/fasta", filename="rCRSd.fa.gz") ```...

hi @ieguinoa, we're in the process of switching from monolithic containers approach to modular, multi-container environments. Check out [`bulker`](http://bulker.io/) documentation, which describes the concept in detail if you're interested :)...

> I'm interested in something like this too and happy to help find and annotate some containers for common index types. Is there a PR for following bulker support, keen...

Thanks for the interest! > For this, currently the only option is that the newly deployed refgenie adds our public refgenie server as genome server and then pulls the data?...

> I'm getting an error when using asset-registry-paths containing a dot (.) in the name dots are used to specify seek keys, see: http://refgenie.databio.org/en/latest/asset_registry_paths/ > the documentation says that asset-registry-paths...

ok, I see the issue. It's because you're mixing two approaches. It's either `-g` argument OR asset registry paths. See below: ``` [mstolarczyk@MichalsMBP genomes]: refgenie build mouse_chrM2x/fasta --files fasta=mouse_chrM2x.fa.gz Using...

Unfortunately no, at the moment asset recipes are set in stone and part of refgenie library. you can submit a PR with a new recipe though.

That's a limitation/design decision that we've made. If you look into the `alias/homo_sapiens--GRCh38/fasta` directory you'll see one copy of the fasta asset version per tag, so adding a new tag...

thanks for reporting. Yes, this might be a concurrency-related issue. But the `None` value in the `asset_parents` section is concerning, which was captured by the config validation. We will look...