How do I prepare my own data for input?

[tzhu-bio]

Thanks for your DEcode!

I have read your GTRD, TargetScan, POSTAR etc files but I don't know how to prepare such data. For example, how to go from ChIP-seq peaks file to generate GTRD file, is there a script available?

[stasaki]

I will make a script for you. Give me a few weeks.

On Wed, Feb 8, 2023 at 3:01 AM Tao Zhu @.***> wrote:

Thanks for your DEcode!

I have read your GTRD, TargetScan, POSTAR etc files but I don't know how to prepare such data. For example, how to go from ChIP-seq peaks file to generate GTRD file, is there a script available?

— Reply to this email directly, view it on GitHub https://github.com/stasaki/DEcode/issues/2, or unsubscribe https://github.com/notifications/unsubscribe-auth/ABNASFQYGCKMVJIETLBRT4TWWNOFNANCNFSM6AAAAAAUU7I2OE . You are receiving this because you are subscribed to this thread.Message ID: @.***>

[stasaki]

Please look at the 'Prepare Input Features' section in the README. Let me know if it doesn't work.

[tzhu-bio]

Thank you for your dedication, I will try it next week.