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WSL - Run `cmdstan` and models under WSL filesystem

2

#### Submission Checklist - [x] Run unit tests - [x] Declare copyright holder and agree to license (see below) #### Summary This PR refactors the WSL functionality introduced in #677...

andrjohns

Bumps [r-lib/actions](https://github.com/r-lib/actions) from 2.2.6 to 2.2.7. Commits 013ba94 Remove test from our workflow 7d98418 setup-r: add Rtools40 ucrt to PATH on Windows 92f7ae8 Fix failing test workflow 0c1a2a6 Failing test...

dependabot[bot]

Error when ~/.cmdstan has a folder inside but no cmdstan installation

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The scenario when the error occurs is: - ~/.cmdstan has a custom folder inside that is not a CmdStan installation, - ~/.cmdstan has no valid CmdStan installation The error: ```...

rok-cesnovar

Error when running MCMC with CmdStanR

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Im getting a new error which im not sure the source of, this is with script that had previously worked fine, but now i’ve installed CmdStanR on a new device...

Jamin-R12

Unexpected non-reproducibility issue when setting initial conditions

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**Describe the bug** I'm running a model with user-specified initial conditions, and despite setting the random seed, things are not reproducible in the way I would expect them to be....

andreashandel

#### Summary Fixes #683 #### Copyright and Licensing Please list the copyright holder for the work you are submitting (this will be you or your assignee, such as a university...

rok-cesnovar

**Describe the bug** It appears that the handling of `#include` statements/`include_paths` may have changed from 0.5.2 to 0.5.3. With 0.5.3, the example from #680 gives this error: ```r library(cmdstanr) #>...

copernican

Consider more efficient serialization of CmdStanFit objects

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**Is your feature request related to a problem? Please describe.** Posterior samples take up a lot of space, and RDS scales poorly. Without compression, the files get pretty big. With...

wlandau

STANCFLAGS in make/local doesn't work

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**Describe the bug** make/local can be used to set CXXFLAGS, LDLIBS, O, STAN_CPP_OPTIMS, STAN_NO_RANGE_CHECKS, but STANCFLAGS set in make/local is not used. **To Reproduce** Add to make local ``` STANCFLAGS=--O1...

avehtari

R-session crashes after successful sampling of a model with many parameters

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### I submitted this as a question on the Stan forums, but I've been able to re-create it on a few different Windows machines since then, so I think it...

AdamCSmithCWS