ColabFold How to get the PDB or template released data information?

Expected Behavior

When I using ColabFold: AlphaFold2 using MMseqs2 (ColabFold v1.2 , model_type: AF2-multimer) with "use_templates" option, I found my predicted structure is much better than without "use_templates" . So, I worried about weather this PDB quries's tempalte was included in current ColabFold databse. But I can't figiure out how to check the PDB tempalte released data in ColabFold.

Is ColabFold using the newest PDB70 databse like 2021-08~ or in line with the AF2-multimer preprint's trainning data 2018-04-30?https://deepmind.com/research/publications/2021/protein-complex-prediction-with-alphafold-multimer

Many thanks!

Dec 10 '21 03:12 FsheriF

We built a database from the pdb70_200916 we had already on the server.

I'll update it in the coming weeks again, maybe set it up to automatically update to the latest version. However, I am a bit busy right now.

Dec 10 '21 10:12 milot-mirdita

Thanks for the clarification, if ColabFold can make PDB tempalte released data as pramaeter in the future, it would be very helpful!

Dec 11 '21 09:12 FsheriF

Thanks for the clarification, if ColabFold can make PDB tempalte released data as pramaeter in the future, it would be very helpful!

Also, requested in #365.

Feb 01 '23 20:02 alirezaomidi