sokrypton
feature request: only search within a list of potential peptides
Hi,
Would it be possible for AfDesign to design peptides that bind a certain structure/domain but to do so for a given length and within a list (fasta file) of potential peptides?
AfDesign would not attempt a peptide that is not in the list, instead giving the best peptide within the list.
Thanks
Not sure I completely follow... Are you looking to rank a list of peptide candidates (not redesign them?)
Yes, one would explore the landscape of best peptide binders within a list (may be a very long list) of possible peptides of a given length.
On Tue, Jun 28, 2022 at 5:15 PM Sergey O @.***> wrote:
Not sure I completely follow... Are you looking to rank a list of peptide candidates (not redesign them?)
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