Tset is ignored on convertalis call against mmseqs gpu accelerated search results

[mcn3159]

Hi,

I'm attempting to call convertalis on an alignment database computed with mmseqs GPU accelerated search. Here are the calls I'm running

Ran makepaddedseqdb using default settings.

mmseqs search queryDB targetDB_gpu results tmp_search --min-seq-id 0.9 --cov-mode 0 -c 0.9 --threads 6 --alignment-mode 3 --gpu 1

mmseqs convertalis queryDB targetDB_gpu results results.tsv --format-output "query,target,evalue,pident,qcov,fident,alnlen,qheader,theader,tset,tsetid" --threads 6

The results look fine, except the tset column is missing, but the tsetid column is still present.

Tset column is present when rerunning the search on the non-padded database without GPU. Not sure if this is expected behavior. Would prefer a way to be able to run the GPU accelerated search and still get the tset column if possible.

Using mmseqs2 version 17.b804f

Thanks