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about createdb, I want to know if the results of the database built by GPU and CPU are different, and whether the GPU version of the database cannot be used for linclust

Open juoliii opened this issue 3 months ago • 1 comments

mmseqs createdb --gpu1 I want to know if the results of the database built by GPU and CPU are different, and whether the GPU version of the database cannot be used for linclust

juoliii avatar Oct 28 '25 08:10 juoliii

Linclust should in theory work, but since the GPU database requires reordering the sequences, the result might differ.

martin-steinegger avatar Oct 28 '25 11:10 martin-steinegger