CCMpred

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Erro in useing cmake

3

when I use cmake ,it encountered the following problem: -- Found these msgpack libs: /usr/lib/x86_64-linux-gnu/libmsgpackc.so -- Could NOT find LibUUID (missing: UUID_LIBRARY UUID_INCLUDE_DIR) -- The CUDA compiler identification is unknown...

whitene

problems of CCMpred compiling

3

I have met some problems when I compile CCMpred on Ubuntu 22.04.2 LTS. Have you @sseemayer got any idea what the problem is? Thanks in advance! My cmake and make...

ylx0925

The CPU runs on a single thread

2

Hello，When I run a program with a CPU, it tells me that only one CPU thread is used.How can I run the program with 6 or more CPU cores as...

liimy1

ERROR when I using make

5

@sseemayer Hi，I met a problem when using CCMpred: (base) czh@X12DAi-N6:~/CCMpred$ make [ 7%] Building C object lib/libconjugrad/CMakeFiles/conjugrad.dir/src/conjugrad.c.o In file included from /home/czh/CCMpred/lib/libconjugrad/src/conjugrad.c:4: /home/czh/CCMpred/lib/libconjugrad/include/conjugrad.h:21:15: error: conflicting types for ‘sqrt’; have ‘float(double)’...

Benny0323

Errors when using make

4

CMake version is 3.22.1 GNU Make version is 4.3 CMake is running without using CUDA Errors occured when using command 'make' kenmarnuls@LAPTOP-Q547HOJF:~/CCMpred$ make [ 7%] Building C object lib/libconjugrad/CMakeFiles/conjugrad.dir/src/conjugrad.c.o In...

ken0414

Many build issues of CCMpred come from users forgetting to clone recursively, or CI/CD pipelines failing due to cloning from a second remote. Since no other users of libconjugrad are...

sseemayer

Why not use the -b argument to generate BRAW files?

2

Hello, I have a question to ask you, when I used **ccmpred example.mat -b example.braw** command to generate braw file, there was an error. **Error: unknown option b at argument...

geqj

Compiling with CUDA

7

I'm using a CUDA 9.2, and the nvcc did not support -arch=sm_20 option. I simply fixed the issue by replacing sm_20 to sm_70 in CMakeLists.txt file.

huhlim

The `-r` option lets users obtain the raw pairwise emissions (e_ij), however I see no way of obtaining site emissions (e_i). Is there any way to output these?

florisvdf

Hello , CMake Error shows the CCMpred is missing the libconjugrad submodule. I had try 'git submodule update', but it didn't work. Anybody can help me? thanks

1

(tf) [lynn@localhost CCMpred]$ git submodule update Bareword found where operator expected at -e line 1, near "9a" (Missing operator before a?) Backslash found where operator expected at -e line 1,...

Lyn-666