Shantanu Singh

@joshmoore said: >> The next step is for you to send us a link to the Docker you already have for doing these conversions, and then Erin will create a...

Over to @ErinWeisbart and @bethac07

> 151G SQ00014812__2016-05-23T20_44_31-Measurement1 > 202G SQ00014812__2016-05-23T20_44_31-Measurement1.ome.zarr @joshmoore – do we expect this 33% increase in storage? From David Logan, I had learned this: > With zlib compression switch on when...

Thanks for the explainer @joshmoore! > A different compression might help, but configuring the pyramid levels will definitely make a difference: Is this a decision that IDR will make (to...

> Were you planning on creating an official openmicroscopy/bioformats2raw docker? @joshmoore would you recommend that @ErinWeisbart creates a docker herself using this?: ``` # See https://github.com/mamba-org/micromamba-docker FROM mambaorg/micromamba COPY --chown=$MAMBA_USER:$MAMBA_USER...

@joshmoore I believe @ErinWeisbart will be following up on this once she is back from vacation. Meanwhile, is it possible to get an IDR identifier while we are working through...

> For the IDR identifier, I'd gently push you back to the standard IDR channels. Of course, will do

Frances said > Your IDR accession number is idr0125. To cite your submission in a manuscript, please include your IDR accession number and the URL to the IDR homepage (https://idr.openmicroscopy.org/)....

We are having this discussion in Slack https://broadinstitute.slack.com/archives/C3QFQ3WQM/p1663329404078119?thread_ts=1663317811.106069&cid=C3QFQ3WQM @EchteRobert will report back here with our conclusion here, once we are set

In the future, we might want to reprocess these 10 plates and include the missing features