slimm

slimm copied to clipboard

Dear @temehi & @agakrawczyk , @agakrawczyk and me ran in problems when using bowtie2 and slimm: 1. Yara, bowtie2 and slimm indizes with Human chr1 & chr11 and C-RVDB (https://rvdb.dbi.udel.edu/)...

your-highness

Explanation of species-level classifcation filed "s_unknown_species"

6

Dear Temesgen, I need some clarification on the output of slimm species-level classification "_profile.tsv". For a test sample I get the following output: ``` taxa_level taxa_id linage abundance read_count species...

your-highness