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conda-forge package

Open ivirshup opened this issue 3 years ago • 4 comments

It would be great if this package could be distributed via condo-forge as well as pip. I'd like for mamba install squidpy to work so the package doesn't have to be special cased when making a conda env.

ivirshup avatar Mar 08 '22 13:03 ivirshup

doable to be considered for next release

giovp avatar Mar 08 '22 13:03 giovp

2 questions:

  • do we wanna go for conda-forge or bioconda? no strong preference
  • shall we package napari/pyqt as well or create a subpackage?

michalk8 avatar Mar 09 '22 11:03 michalk8

I'd go for conda-forge. We've got scanpy, anndata, and scvi-tools in there, so there more knowledge of the CI system in scverse.

Also if you go bioconda, but all your dependencies use conda-forge now you're pulling from more channels which can make dependency resolution slow or even fail.

ivirshup avatar Mar 09 '22 12:03 ivirshup

shall we package napari/pyqt as well or create a subpackage?

let's create a subpackage, talk on Fri about this

giovp avatar Mar 09 '22 12:03 giovp

I believe this can be close as we have it in conda now

giovp avatar Aug 19 '22 07:08 giovp