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feat: add layer argument for sc.tl.score_genes_cell_cycle

Open shinthor opened this issue 1 year ago • 2 comments

Simple addition of the layer argument which is already included in sc.tl.score_genes so that you can use your own layer instead of being restricted to what is stored in adata.X

  • [ ] Closes #
  • [x] Tests included or not required because:
  • [ ] Release notes not necessary because:

shinthor avatar Jul 02 '24 21:07 shinthor

Codecov Report

Attention: Patch coverage is 0% with 1 line in your changes missing coverage. Please review.

Project coverage is 76.52%. Comparing base (208115d) to head (4ed4477).

Additional details and impacted files
@@           Coverage Diff           @@
##             main    #3138   +/-   ##
=======================================
  Coverage   76.52%   76.52%           
=======================================
  Files         109      109           
  Lines       12483    12483           
=======================================
  Hits         9553     9553           
  Misses       2930     2930           
Files Coverage Δ
src/scanpy/tools/_score_genes.py 85.10% <0.00%> (ø)

codecov[bot] avatar Jul 02 '24 21:07 codecov[bot]

don’t forget to mark this as ready for review if you think it’s ready!

flying-sheep avatar Sep 09 '25 15:09 flying-sheep