Anndata.concat([adata1, adata2, ...]) not working as expected

[mahati-acog]

Hi

I am trying to concatenate multiple anndata objects into one. If I consider axis=0, it is combining along .obs and if I consider axis=1, it is combining along .var. But I want to get all the elements in one final anndata object without missing any elements of anndata object.

[Zethson]

Could you provide a minimal example setup of this and the expected output?

[cqbsyn]

Hi, did you solve this problem？

[ivirshup]

Without more details, it's difficult to tell what exactly should happen here. Most use cases I can think of here should be possible by passing join="outer".

I'm going to close this, but can reopen given more details.